Course:
Instructor:
Course Program:
cccc
Reference Books:
Principles of Neural Science, 4e,
Kandel, Schwartz, Jessell, McGraw-Hill, 2002. [QP355.2 .P76 2000]
Weekly Program
Tentative program
| # | date (dd.mm.yyyy) |
Description | Presentation |
|---|---|---|---|
| == Basics == | |||
| 1 | 24.09.2012 | Neuron (Cell types, working of neurons, information processing, electrical and synaptic) by Yasemin Keskin-Ergen, Biomedical Engineering, Bogazici U. Reading: Kandel4e -Chapter 2. Nerve Cells and Behavior -Chapter 6. Ion Channels -Chapter 7. Membrane Potential -Chapter 9. Propagated Signaling: The Action Potential -Chapter 13. Modulation of Synaptic Transmission: Second Messengers |
Introduction to brain dynamics Action potential |
| 2 | 01.10.2012 | Neuron (Cell types, working of neurons, information processing, electrical and synaptic) by Yasemin Keskin-Ergen, Biomedical Engineering, Bogazici U. Reading: Kandel4e -Chapter 10. Overview of Synaptic Transmission -Chapter 12. Synaptic Integration -Chapter 63. Cellular Mechanisms of Learning and the Biological Basis of Individuality (if time permits) |
Synaptic Transmission Cellular mechanisms of learning and memory |
| 3 | 08.10.2012 | Human brain (Anatomy) by Ugur Ture, Neurosurgery, Yeditepe U. |
|
| 4 | 15.10.2012 | Human brain (Distribute vs Local, Development, Evolution) by Canan Aykut-Bingol, Neurology, Yeditepe U. |
|
| 5 | 22.10.2012 | Human brain (Disorders of the brain: Epilepsy, Dementia, …) by Canan Aykut-Bingol, Neurology, Yeditepe U. |
|
| - | 29.10.2012 | holiday | - |
| 6 | 05.11.2012 | Functional neuroimaging (EEG, MEG, fMRI, PET, fNIRS, DWI, DTI, ERP) by Ata Akin, Biomedical Engineering, Bogazici U. Friston2009-Modalities modes and models in functional neuroimaging -- science Savoy2001-History and future directions of human brain mapping and functional neuroimaging -- Acta Psychologica Shibasaki2008-Human brain mapping- hemodynamic response and electrophysiology -- Clinical Neurophysiology |
Functional neuroimaging |
| 7 | 12.11.2012 | Functional neuroimaging (EEG, MEG, fMRI, PET, fNIRS, DWI, DTI, ERP) by Ata Akin, Biomedical Engineering, Bogazici U. Villringer1997-Non-invasive optical spectroscopy and imaging of human brain function |
|
| == Advanced == | |||
| 8 | 19.11.2012 | Physiology and psychophysics of the sense of touch by Burak Guclu, Biomedical Engineering, Bogazici U. Reading: Kandel4e -Chapter 21: Coding of Sensory Information, -Chapter 22: The Bodily Senses, -Chapter 23: Touch |
|
| 9 | 26.11.2012 | Electrical source imaging by A. Deniz Duru, Biomedical Engineering, Bogazici U. Hallez-2007-Review on solving the forward problem in eeg source analysis -- journal of neuroengineering and rehabilitation Gonzalez2004-EEG source imaging.pdf| |
Electrical Source Imaging |
| 10 | 03.12.2012 | Multi model image fusion by A. Deniz Duru, Biomedical Engineering, Bogazici U. |
Multimodal Image Fusion |
| 11 | 10.12.2012 | Hemispheric asymmetries by Resit Canbeyli, Psychology, Bogazici U. Hopkins2008-Theoretical speculations on the evolutionary origins of hemispheric specialization Toga2003-Mapping brain asymmetry Vallortigara2006-The evolutionary psychology of left and right: costs and benefits of lateralization Hutsler2003-Hemispheric asymmetries in cerebral cortical networks |
Hemispheric Asymmetry |
| 12 | 17.12.2012 | Connectivity by Haluk Bingol, Computer Engineering, Bogazici U. Rubinov2010-Complex network measures of brain connectivity: Uses and interpretations |
Complex Networks and Brain Dynamics: A Dilbert's view |
| 13 | 24.12.2012 | Brain computer interface by Albert Ali Salah, Computer Engineering, Bogazici U. Gurkok2012-Brain–Computer Interfaces for Multimodal Interaction: A Survey and Principles -- IJHCI |
|
Reading materials:
-
Kandel5e
Principles of Neural Science, 5e,
Kandel, Schwartz, Jessell, McGraw-Hill, 2013. [QP355.2 .P76 2013] in reserve. -
Purves
Neuroscience,
Purves, G.Augustine, Fitzpatrick, Hall, Lamantia, McNamara, Williams, 1997. [QP355.2 .N487 1997] in reserve.
Syllabus
| Course | cmpe59i Brain Dynamics |
| Semester | 2014 Spring |
| Instructor | Haluk Bingol |
| TA | none |
| Web Site | http://www.cmpe.boun.edu.tr/courses/cmpe59i |
| Time/Room | Lectures: WWW 567 @ ETA B5 |
| First Meeting | 18.02.2014 |
| Text Book | none |
| Reference Books | - Principles of Neural Science, 4e, Kandel, Schwartz, Jessell, McGraw-Hill, 2002. [QP355.2 .P76 2000] - The cognitive neurosciences , 4e, Gazzaniga (ed.), MIT Press, 2009. [QP360.5 .N4986 2009] - Neuroscience: Exploring the Brain, 4e, Bear, Connors, Paradio, LWW, 2007. [ QP355.2 .B42 2007] |
| Grading | - 30% Midterm - 50% Project - 20% Contribution to Discussions & Homeworks & Attendance |
| Catalog Data | Single neuron to human brain: Cell types, cellular transmission mechanisms. Brain anatomy, development, evolution. Brain disorders. Measurable quantities, processing and their interpretations. Mechanisms, approaches, and models. |
| Prerequisites | none |
Extra material
proposed by students
Announcements:
| Due Date | Description |
|---|---|
| 30.06.2014/10:00 | Final: Project presentations @ ETA A2 |
| 28.05.2014/10:00 | Take home exam -ends |
| 18.04.2014/10:00 | Take home exam -stars |
| 14.04.2014/10:00 | the project and the team proposal |